Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10832 | Not Available | Negative | 6299429 - 6300520 | 41821.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_10833 | Not Available | Negative | 6300671 - 6301819 | 43242.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_10834 | Not Available | Negative | 6301965 - 6302912 | 36010.8 |
| protein of unknown function | SAMN04488505_10835 | Not Available | Negative | 6303046 - 6303549 | 18340.8 |
| dihydroorotase | SAMN04488505_10836 | Not Available | Negative | 6303570 - 6304889 | 48032.8 |
| predicted thiol-disulfide oxidoreductase yuxk, dcc family | SAMN04488505_10837 | Not Available | Negative | 6305031 - 6305435 | 15247.8 |
| hypothetical protein | SAMN04488505_10838 | Not Available | Negative | 6305422 - 6306375 | 37526.5 |
| hypothetical protein | SAMN04488505_10839 | Not Available | Negative | 6306387 - 6307019 | 25022.9 |
| hypothetical protein | SAMN04488505_10840 | Not Available | Negative | 6307164 - 6307523 | 12456.1 |
| transcriptional regulator, contains xre-family hth domain | SAMN04488505_10841 | Not Available | Positive | 6307835 - 6308167 | 12452.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
