Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase-4 subunit b | SAMN04488505_10822 | Not Available | Positive | 6288747 - 6290654 | 72525.6 |
| protein of unknown function | SAMN04488505_10823 | Not Available | Positive | 6290712 - 6291599 | 33224.7 |
| hypothetical protein | SAMN04488505_10824 | Not Available | Positive | 6291708 - 6292106 | 14945.0 |
| topoisomerase-4 subunit a | SAMN04488505_10825 | Not Available | Positive | 6292276 - 6294813 | 96152.9 |
| hypothetical protein | SAMN04488505_10826 | Not Available | Negative | 6294814 - 6294966 | 5828.88 |
| dehydrogenase (flavoprotein) | SAMN04488505_10827 | Not Available | Negative | 6295033 - 6296172 | 42762.2 |
| methyltransferase domain-containing protein | SAMN04488505_10828 | Not Available | Negative | 6296165 - 6296863 | 27074.5 |
| predicted naringenin-chalcone synthase | SAMN04488505_10829 | Not Available | Negative | 6296860 - 6297975 | 40644.2 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | SAMN04488505_10830 | Not Available | Negative | 6297968 - 6298831 | 32990.1 |
| polyisoprenoid-binding protein ycei | SAMN04488505_10831 | Not Available | Negative | 6298841 - 6299371 | 19046.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
