Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | SAMN04488505_10812 | Not Available | Positive | 6274821 - 6276758 | 75272.3 |
| protein of unknown function | SAMN04488505_10813 | Not Available | Positive | 6277008 - 6277901 | 33422.1 |
| stress-induced acidophilic repeat motif-containing protein | SAMN04488505_10814 | Not Available | Negative | 6278331 - 6278705 | 13896.0 |
| hypothetical protein | SAMN04488505_10815 | Not Available | Negative | 6278769 - 6278948 | 6889.37 |
| hypothetical protein | SAMN04488505_10816 | Not Available | Positive | 6279260 - 6279355 | 3531.39 |
| alpha-glucosidase | SAMN04488505_10817 | Not Available | Negative | 6280051 - 6282444 | 92991.1 |
| uncharacterized protein | SAMN04488505_10818 | Not Available | Negative | 6282789 - 6283814 | 36860.0 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488505_10819 | Not Available | Positive | 6283907 - 6287050 | 120691.0 |
| two component transcriptional regulator, luxr family | SAMN04488505_10820 | Not Available | Positive | 6287149 - 6287781 | 23632.3 |
| hypothetical protein | SAMN04488505_10821 | Not Available | Negative | 6288358 - 6288495 | 5358.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
