Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase class a | SAMN04488505_1082 | Not Available | Positive | 6266133 - 6267041 | 34267.2 |
| hypothetical protein | SAMN04488505_1083 | Not Available | Negative | 6267075 - 6267203 | 4742.01 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN04488505_1084 | Not Available | Positive | 6267511 - 6268065 | 21077.0 |
| alkyl hydroperoxide reductase subunit d | SAMN04488505_1085 | Not Available | Positive | 6268281 - 6268868 | 21360.9 |
| lsu ribosomal protein l28p | SAMN04488505_1086 | Not Available | Positive | 6269163 - 6269423 | 9904.27 |
| lsu ribosomal protein l33p | SAMN04488505_1087 | Not Available | Positive | 6269452 - 6269634 | 6989.59 |
| protein of unknown function | SAMN04488505_1088 | Not Available | Positive | 6269725 - 6269895 | 6288.71 |
| signal recognition particle-docking protein ftsy | SAMN04488505_1089 | Not Available | Positive | 6270085 - 6271080 | 36025.5 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN04488505_10810 | Not Available | Positive | 6271507 - 6272757 | 47616.4 |
| atp-dependent rna helicase dead | SAMN04488505_10811 | Not Available | Positive | 6272968 - 6274713 | 65358.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
