Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f5/8 type c domain-containing protein | SAMN04488505_107336 | Not Available | Negative | 6252214 - 6253950 | 65767.3 |
| hypothetical protein | SAMN04488505_107337 | Not Available | Negative | 6254080 - 6254472 | 14973.1 |
| glutamine synthetase | SAMN04488505_107338 | Not Available | Negative | 6254587 - 6256782 | 81979.1 |
| phosphoribosylformylglycinamidine synthase subunit ii | SAMN04488505_107339 | Not Available | Positive | 6257324 - 6259579 | 81725.4 |
| glycine c-acetyltransferase | SAMN04488505_107340 | Not Available | Negative | 6260295 - 6261536 | 46083.8 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN04488505_107341 | Not Available | Positive | 6261747 - 6263411 | 60476.3 |
| methylglutaconyl-coa hydratase | SAMN04488505_107342 | Not Available | Positive | 6263616 - 6264452 | 30215.7 |
| glpgli family protein | SAMN04488505_107343 | Not Available | Positive | 6264497 - 6265165 | 25514.2 |
| integrase core domain-containing protein | SAMN04488505_107344 | Not Available | Negative | 6265351 - 6265627 | 10272.4 |
| transposase | SAMN04488505_1081 | Not Available | Negative | 6265628 - 6265997 | 14116.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
