Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | SAMN04488505_107316 | Not Available | Positive | 6229829 - 6230824 | 37647.4 |
| lsu ribosomal protein l17p | SAMN04488505_107317 | Not Available | Positive | 6230946 - 6231443 | 18229.1 |
| hypothetical protein | SAMN04488505_107318 | Not Available | Positive | 6231581 - 6232420 | 31797.1 |
| carbamoyl-phosphate synthase small subunit | SAMN04488505_107319 | Not Available | Positive | 6232453 - 6233658 | 44641.4 |
| aspartate aminotransferase | SAMN04488505_107320 | Not Available | Negative | 6234525 - 6235754 | 45161.4 |
| protein of unknown function | SAMN04488505_107321 | Not Available | Negative | 6236013 - 6236420 | 14729.8 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (e1) component | SAMN04488505_107322 | Not Available | Positive | 6236654 - 6239029 | 88411.5 |
| glycerate dehydrogenase | SAMN04488505_107323 | Not Available | Positive | 6239271 - 6240230 | 34064.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488505_107324 | Not Available | Positive | 6240563 - 6241276 | 27661.4 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN04488505_107325 | Not Available | Negative | 6241363 - 6242040 | 25129.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
