Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l18 | SAMN04488505_107306 | Not Available | Positive | 6223461 - 6223814 | 12694.3 |
| small subunit ribosomal protein s5 | SAMN04488505_107307 | Not Available | Positive | 6223862 - 6224380 | 17944.2 |
| lsu ribosomal protein l30p | SAMN04488505_107308 | Not Available | Positive | 6224416 - 6224601 | 6801.58 |
| lsu ribosomal protein l15p | SAMN04488505_107309 | Not Available | Positive | 6224766 - 6225212 | 16078.5 |
| protein translocase subunit secy/sec61 alpha | SAMN04488505_107310 | Not Available | Positive | 6225291 - 6226634 | 48625.4 |
| methionine aminopeptidase, type i | SAMN04488505_107311 | Not Available | Positive | 6226730 - 6227530 | 28995.7 |
| bacterial translation initiation factor 1 (bif-1) | SAMN04488505_107312 | Not Available | Positive | 6227698 - 6227916 | 8234.36 |
| ssu ribosomal protein s13p | SAMN04488505_107313 | Not Available | Positive | 6228158 - 6228538 | 14305.6 |
| small subunit ribosomal protein s11 | SAMN04488505_107314 | Not Available | Positive | 6228631 - 6229032 | 14122.0 |
| ssu ribosomal protein s4p | SAMN04488505_107315 | Not Available | Positive | 6229199 - 6229804 | 22641.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
