Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xtp/ditp diphosphohydrolase | SAMN04488505_107276 | Not Available | Negative | 6199464 - 6200051 | 21537.5 |
| hypothetical protein | SAMN04488505_107277 | Not Available | Negative | 6200134 - 6200628 | 17948.2 |
| branched chain amino acid aminotransferase apoenzyme | SAMN04488505_107278 | Not Available | Positive | 6200718 - 6201830 | 41456.8 |
| hypothetical protein | SAMN04488505_107279 | Not Available | Positive | 6201970 - 6202254 | 10522.1 |
| ssu ribosomal protein s12p | SAMN04488505_107280 | Not Available | Positive | 6202627 - 6203007 | 14173.5 |
| ssu ribosomal protein s7p | SAMN04488505_107281 | Not Available | Positive | 6203039 - 6203506 | 17516.2 |
| collagen triple helix repeat-containing protein | SAMN04488505_107282 | Not Available | Negative | 6203791 - 6206787 | 97409.0 |
| hypothetical protein | SAMN04488505_107283 | Not Available | Negative | 6206800 - 6207147 | 12786.2 |
| hypothetical protein | SAMN04488505_107284 | Not Available | Negative | 6207178 - 6208329 | 42460.2 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_107285 | Not Available | Negative | 6208341 - 6208838 | 17955.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
