Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase, tigr00027 family | SAMN04488505_107256 | Not Available | Negative | 6180484 - 6181332 | 30686.0 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN04488505_107257 | Not Available | Negative | 6181370 - 6181774 | 15041.9 |
| helix-turn-helix domain-containing protein | SAMN04488505_107258 | Not Available | Negative | 6181849 - 6182643 | 29953.0 |
| hypothetical protein | SAMN04488505_107259 | Not Available | Positive | 6182809 - 6183528 | 27397.6 |
| hypothetical protein | SAMN04488505_107260 | Not Available | Positive | 6183769 - 6183918 | 5767.1 |
| tpr repeat-containing protein | SAMN04488505_107261 | Not Available | Negative | 6184087 - 6186735 | 102320.0 |
| nucleoside phosphorylase | SAMN04488505_107262 | Not Available | Negative | 6186695 - 6188347 | 61506.7 |
| Trna-met | Not Available | Not Available | Positive | 6188568 - 6188641 | Not Available |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN04488505_107264 | Not Available | Negative | 6188720 - 6189277 | 21024.3 |
| terpene synthase family, metal binding domain | SAMN04488505_107265 | Not Available | Positive | 6189491 - 6190492 | 38976.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
