Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-loop protein of unknown function | SAMN04488505_107246 | Not Available | Negative | 6165204 - 6168065 | 109000.0 |
| fic/doc family protein | SAMN04488505_107247 | Not Available | Positive | 6168452 - 6169444 | 37776.9 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_107248 | Not Available | Positive | 6169682 - 6170845 | 42221.0 |
| hypothetical protein | SAMN04488505_107249 | Not Available | Positive | 6170894 - 6171673 | 28503.6 |
| alpha-galactosidase | SAMN04488505_107250 | Not Available | Negative | 6171720 - 6173519 | 67064.3 |
| alpha-l-fucosidase | SAMN04488505_107251 | Not Available | Negative | 6173532 - 6175421 | 70335.9 |
| alpha-l-fucosidase 2 | SAMN04488505_107252 | Not Available | Negative | 6175445 - 6177997 | 94717.9 |
| acyl-coa thioester hydrolase | SAMN04488505_107253 | Not Available | Positive | 6179173 - 6179589 | 15760.2 |
| hypothetical protein | SAMN04488505_107254 | Not Available | Positive | 6179612 - 6179977 | 14371.3 |
| conserved hypothetical protein | SAMN04488505_107255 | Not Available | Negative | 6179991 - 6180203 | 7749.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
