Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m28 | SAMN04488505_107236 | Not Available | Positive | 6152875 - 6154335 | 53726.9 |
| transcriptional regulator, hxlr family | SAMN04488505_107237 | Not Available | Negative | 6154337 - 6154708 | 14166.5 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488505_107238 | Not Available | Positive | 6154789 - 6155607 | 29829.9 |
| hypothetical protein | SAMN04488505_107239 | Not Available | Negative | 6155609 - 6156469 | 32803.6 |
| hypothetical protein | SAMN04488505_107240 | Not Available | Positive | 6156668 - 6157903 | 45519.8 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04488505_107241 | Not Available | Negative | 6157919 - 6159130 | 44712.6 |
| repeat domain-containing protein | SAMN04488505_107242 | Not Available | Positive | 6159284 - 6160423 | 42291.4 |
| suppressor of fused protein (sufu) | SAMN04488505_107243 | Not Available | Positive | 6160501 - 6161595 | 41255.6 |
| hypothetical protein | SAMN04488505_107244 | Not Available | Positive | 6161750 - 6162964 | 43977.7 |
| atp-dependent helicase lhr and lhr-like helicase | SAMN04488505_107245 | Not Available | Negative | 6163012 - 6165192 | 82558.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
