Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antagonist of kipi | SAMN04488505_107216 | Not Available | Negative | 6128844 - 6129845 | 36599.5 |
| inhibitor of kina | SAMN04488505_107217 | Not Available | Negative | 6129864 - 6130577 | 26293.8 |
| uncharacterized iron-regulated membrane protein | SAMN04488505_107218 | Not Available | Negative | 6130574 - 6131746 | 43881.1 |
| iron complex outermembrane recepter protein | SAMN04488505_107219 | Not Available | Negative | 6131826 - 6134510 | 98901.3 |
| transcriptional regulator, tetr family | SAMN04488505_107220 | Not Available | Negative | 6134735 - 6135334 | 23085.1 |
| transcriptional regulator, tetr family | SAMN04488505_107221 | Not Available | Positive | 6135578 - 6136177 | 22756.3 |
| polyisoprenoid-binding protein ycei | SAMN04488505_107222 | Not Available | Positive | 6136216 - 6136788 | 20776.7 |
| serine palmitoyltransferase | SAMN04488505_107223 | Not Available | Positive | 6137173 - 6138363 | 43419.3 |
| hypothetical protein | SAMN04488505_107224 | Not Available | Positive | 6138360 - 6139532 | 44643.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488505_107225 | Not Available | Positive | 6139608 - 6140594 | 36472.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
