Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | SAMN04488505_107206 | Not Available | Negative | 6119457 - 6120188 | 26834.8 |
| ribose-phosphate pyrophosphokinase | SAMN04488505_107207 | Not Available | Positive | 6120371 - 6121321 | 34910.4 |
| lsu ribosomal protein l25p | SAMN04488505_107208 | Not Available | Positive | 6121354 - 6121944 | 21857.6 |
| peptidyl-trna hydrolase, pth1 family | SAMN04488505_107209 | Not Available | Positive | 6122105 - 6122686 | 21659.2 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04488505_107210 | Not Available | Positive | 6122733 - 6123344 | 23339.0 |
| transcriptional regulator, marr family | SAMN04488505_107211 | Not Available | Negative | 6123396 - 6123830 | 17049.8 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN04488505_107212 | Not Available | Positive | 6123910 - 6126039 | 77495.8 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488505_107213 | Not Available | Negative | 6126033 - 6126914 | 32551.9 |
| mn2+ and fe2+ transporters of the nramp family | SAMN04488505_107214 | Not Available | Negative | 6126942 - 6128120 | 41703.1 |
| upf0271 protein | SAMN04488505_107215 | Not Available | Negative | 6128117 - 6128857 | 26531.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
