Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein c | SAMN04488505_107196 | Not Available | Positive | 6110706 - 6111368 | 24907.1 |
| ccmd family protein | SAMN04488505_107197 | Not Available | Positive | 6111365 - 6111607 | 9211.52 |
| glutamate dehydrogenase (nad(p)+) | SAMN04488505_107198 | Not Available | Positive | 6111638 - 6113056 | 52308.0 |
| hypothetical protein | SAMN04488505_107199 | Not Available | Negative | 6112996 - 6113169 | 6321.62 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN04488505_107200 | Not Available | Negative | 6113207 - 6113650 | 17302.4 |
| amp nucleosidase | SAMN04488505_107201 | Not Available | Positive | 6113711 - 6114481 | 28455.4 |
| peptide/nickel transport system atp-binding protein | SAMN04488505_107202 | Not Available | Positive | 6114642 - 6116387 | 64871.3 |
| s-adenosylmethionine--trna ribosyltransferase-isomerase | SAMN04488505_107203 | Not Available | Positive | 6116478 - 6117527 | 40025.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN04488505_107204 | Not Available | Positive | 6117628 - 6118302 | 24515.9 |
| predicted dehydrogenase | SAMN04488505_107205 | Not Available | Negative | 6118378 - 6119358 | 36334.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
