Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_107176 | Not Available | Positive | 6086653 - 6087363 | 24258.5 |
| mannonate dehydratase | SAMN04488505_107177 | Not Available | Negative | 6087432 - 6088601 | 43819.4 |
| glycerate 2-kinase | SAMN04488505_107178 | Not Available | Negative | 6088665 - 6089975 | 46158.6 |
| hypothetical protein | SAMN04488505_107179 | Not Available | Negative | 6089972 - 6090409 | 17408.2 |
| imidazolonepropionase | SAMN04488505_107180 | Not Available | Positive | 6090612 - 6093683 | 112499.0 |
| imidazolonepropionase | SAMN04488505_107181 | Not Available | Positive | 6093780 - 6095075 | 47400.5 |
| tyrosyl-trna synthetase | SAMN04488505_107182 | Not Available | Negative | 6095158 - 6096441 | 48343.3 |
| molecular chaperone hsca | SAMN04488505_107183 | Not Available | Positive | 6096687 - 6098549 | 68209.6 |
| dtdp-4-dehydrorhamnose reductase | SAMN04488505_107184 | Not Available | Negative | 6098615 - 6099481 | 32168.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN04488505_107185 | Not Available | Negative | 6099487 - 6100047 | 21097.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
