Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488505_107166 | Not Available | Positive | 6071927 - 6072955 | 39541.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_107167 | Not Available | Positive | 6073068 - 6076499 | 125510.0 |
| starch-binding associating with outer membrane | SAMN04488505_107168 | Not Available | Positive | 6076510 - 6078036 | 55244.0 |
| hypothetical protein | SAMN04488505_107169 | Not Available | Positive | 6078140 - 6079450 | 50348.8 |
| beta-galactosidase | SAMN04488505_107170 | Not Available | Positive | 6079695 - 6082151 | 92051.1 |
| alginate lyase | SAMN04488505_107171 | Not Available | Positive | 6082209 - 6083399 | 45737.0 |
| hypothetical protein | SAMN04488505_107172 | Not Available | Positive | 6083527 - 6083766 | 9282.45 |
| hypothetical protein | SAMN04488505_107173 | Not Available | Negative | 6083772 - 6085085 | 50496.6 |
| dna-binding transcriptional regulator, marr family | SAMN04488505_107174 | Not Available | Negative | 6085214 - 6085687 | 18116.4 |
| arac family transcriptional regulator | SAMN04488505_107175 | Not Available | Positive | 6085728 - 6086561 | 32212.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
