Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN04488505_107146 | Not Available | Negative | 6043466 - 6045523 | 76373.1 |
| outer membrane transport energization protein tonb (tc 2.c.1.1.1) | SAMN04488505_107147 | Not Available | Positive | 6046780 - 6047619 | 29886.6 |
| phosphoenolpyruvate carboxylase, type 1 | SAMN04488505_107148 | Not Available | Positive | 6047786 - 6050368 | 97431.5 |
| 6-phosphogluconate dehydrogenase (decarboxylating) | SAMN04488505_107149 | Not Available | Positive | 6050584 - 6051999 | 51417.3 |
| glucose-6-phosphate 1-dehydrogenase | SAMN04488505_107150 | Not Available | Positive | 6052097 - 6053599 | 57293.9 |
| 6-phosphogluconolactonase | SAMN04488505_107151 | Not Available | Positive | 6053690 - 6054415 | 27470.8 |
| hypothetical protein | SAMN04488505_107152 | Not Available | Positive | 6054864 - 6055025 | 6440.02 |
| alpha-l-fucosidase | SAMN04488505_107153 | Not Available | Positive | 6055000 - 6056454 | 54980.5 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN04488505_107154 | Not Available | Positive | 6056451 - 6057194 | 27717.1 |
| glutamate synthase domain-containing protein 2 | SAMN04488505_107155 | Not Available | Negative | 6057284 - 6058867 | 58450.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
