Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_107136 | Not Available | Positive | 6031100 - 6034297 | 116733.0 |
| starch-binding associating with outer membrane | SAMN04488505_107137 | Not Available | Positive | 6034322 - 6035767 | 53738.0 |
| hypothetical protein | SAMN04488505_107138 | Not Available | Negative | 6035903 - 6036406 | 18863.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488505_107139 | Not Available | Negative | 6036513 - 6037298 | 27467.0 |
| predicted acyltransferase | SAMN04488505_107140 | Not Available | Negative | 6037395 - 6038519 | 42181.5 |
| transcriptional regulator, laci family | SAMN04488505_107141 | Not Available | Positive | 6038582 - 6039622 | 38474.0 |
| transcriptional regulator, hxlr family | SAMN04488505_107142 | Not Available | Negative | 6039650 - 6040057 | 15254.0 |
| short-chain dehydrogenase | SAMN04488505_107143 | Not Available | Positive | 6040148 - 6040948 | 29339.5 |
| alcohol dehydrogenase | SAMN04488505_107144 | Not Available | Positive | 6040991 - 6041992 | 36200.4 |
| galactokinase | SAMN04488505_107145 | Not Available | Positive | 6042196 - 6043389 | 43912.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
