Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN04488505_107126 | Not Available | Positive | 6019193 - 6020089 | 32743.9 |
| 3',5'-cyclic-nucleotide phosphodiesterase | SAMN04488505_107127 | Not Available | Negative | 6020135 - 6021079 | 34423.8 |
| hypothetical protein | SAMN04488505_107128 | Not Available | Negative | 6021093 - 6021458 | 13997.4 |
| hypothetical protein | SAMN04488505_107129 | Not Available | Negative | 6021455 - 6021958 | 19283.5 |
| peptidase family s41 | SAMN04488505_107130 | Not Available | Negative | 6022391 - 6023923 | 55384.8 |
| hypothetical protein | SAMN04488505_107131 | Not Available | Negative | 6024410 - 6024979 | 20787.9 |
| hypothetical protein | SAMN04488505_107132 | Not Available | Negative | 6024997 - 6025371 | 13998.0 |
| alpha-1,2-mannosidase, putative | SAMN04488505_107133 | Not Available | Positive | 6025529 - 6027823 | 86532.0 |
| abc-type multidrug transport system, atpase and permease component | SAMN04488505_107134 | Not Available | Positive | 6027930 - 6029708 | 68331.4 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04488505_107135 | Not Available | Positive | 6029801 - 6030625 | 30728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
