Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_107116 | Not Available | Positive | 6005994 - 6006959 | 34279.3 |
| beta-lactamase | SAMN04488505_107117 | Not Available | Negative | 6007311 - 6008522 | 45033.7 |
| t5orf172 domain-containing protein | SAMN04488505_107118 | Not Available | Negative | 6008689 - 6009405 | 27811.7 |
| tigr00375 family protein | SAMN04488505_107119 | Not Available | Positive | 6009568 - 6012822 | 120836.0 |
| cxxc motif-containing protein, duf1111 family | SAMN04488505_107120 | Not Available | Negative | 6012855 - 6014183 | 47955.9 |
| imelysin | SAMN04488505_107121 | Not Available | Negative | 6014259 - 6015338 | 39100.0 |
| rieske | SAMN04488505_107122 | Not Available | Negative | 6015352 - 6015777 | 15601.9 |
| hypothetical protein | SAMN04488505_107123 | Not Available | Negative | 6015796 - 6017049 | 46367.2 |
| alpha-l-fucosidase | SAMN04488505_107124 | Not Available | Positive | 6017280 - 6018620 | 50897.2 |
| lactoylglutathione lyase | SAMN04488505_107125 | Not Available | Negative | 6018623 - 6019087 | 17651.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
