Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase small subunit | SAMN04488505_10796 | Not Available | Positive | 5979367 - 5980746 | 50798.4 |
| xanthine dehydrogenase large subunit | SAMN04488505_10797 | Not Available | Positive | 5980750 - 5983059 | 83367.8 |
| xanthine dehydrogenase accessory factor | SAMN04488505_10798 | Not Available | Positive | 5983022 - 5983999 | 37070.6 |
| urate oxidase | SAMN04488505_10799 | Not Available | Negative | 5984003 - 5984848 | 31576.2 |
| allantoinase | SAMN04488505_107100 | Not Available | Positive | 5984926 - 5986257 | 48161.9 |
| allantoate deiminase | SAMN04488505_107101 | Not Available | Positive | 5986294 - 5987526 | 43978.4 |
| (s)-ureidoglycine aminohydrolase | SAMN04488505_107102 | Not Available | Positive | 5987508 - 5988254 | 27507.1 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | SAMN04488505_107103 | Not Available | Positive | 5988251 - 5988757 | 18693.5 |
| 5-hydroxyisourate hydrolase | SAMN04488505_107104 | Not Available | Positive | 5988754 - 5989095 | 12838.0 |
| hypothetical protein | SAMN04488505_107105 | Not Available | Positive | 5989257 - 5990687 | 53252.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
