Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10786 | Not Available | Positive | 5973387 - 5973548 | 5912.28 |
| hypothetical protein | SAMN04488505_10787 | Not Available | Positive | 5973570 - 5973746 | 6468.26 |
| hypothetical protein | SAMN04488505_10788 | Not Available | Positive | 5973796 - 5973966 | 5852.3 |
| hypothetical protein | SAMN04488505_10789 | Not Available | Positive | 5974047 - 5974229 | 6359.83 |
| hypothetical protein | SAMN04488505_10790 | Not Available | Positive | 5974462 - 5974659 | 6941.66 |
| lanthionine synthetase c-like protein | SAMN04488505_10791 | Not Available | Positive | 5974791 - 5976014 | 45119.9 |
| two component transcriptional regulator, luxr family | SAMN04488505_10792 | Not Available | Positive | 5976168 - 5976797 | 22970.9 |
| hypothetical protein | SAMN04488505_10793 | Not Available | Negative | 5976772 - 5977248 | 17837.4 |
| omega-6 fatty acid desaturase (delta-12 desaturase) | SAMN04488505_10794 | Not Available | Negative | 5977300 - 5978265 | 36470.2 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN04488505_10795 | Not Available | Negative | 5978290 - 5979162 | 33958.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
