Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rsbt antagonist protein rsbs | SAMN04488505_10776 | Not Available | Positive | 5961783 - 5962190 | 14662.0 |
| serine/threonine-protein kinase rsbt | SAMN04488505_10777 | Not Available | Positive | 5962198 - 5962584 | 13911.1 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN04488505_10778 | Not Available | Positive | 5962577 - 5963593 | 37280.5 |
| hypothetical protein | SAMN04488505_10779 | Not Available | Positive | 5963594 - 5965225 | 62339.5 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN04488505_10780 | Not Available | Positive | 5965278 - 5965682 | 15014.0 |
| alpha-1,2-mannosidase, putative | SAMN04488505_10781 | Not Available | Positive | 5965827 - 5968055 | 84641.2 |
| hypothetical protein | SAMN04488505_10782 | Not Available | Negative | 5968147 - 5969262 | 40045.5 |
| peptidase c39 family protein | SAMN04488505_10783 | Not Available | Negative | 5969379 - 5969783 | 15009.9 |
| thiopeptide-type bacteriocin biosynthesis domain-containing protein | SAMN04488505_10784 | Not Available | Negative | 5969797 - 5972955 | 119683.0 |
| hypothetical protein | SAMN04488505_10785 | Not Available | Positive | 5973157 - 5973336 | 6383.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
