Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN04488505_10766 | Not Available | Positive | 5946907 - 5947929 | 37466.3 |
| alcohol dehydrogenase, class iv | SAMN04488505_10767 | Not Available | Positive | 5948053 - 5949210 | 40916.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488505_10768 | Not Available | Positive | 5949207 - 5950133 | 33541.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN04488505_10769 | Not Available | Positive | 5950169 - 5951176 | 36004.8 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN04488505_10770 | Not Available | Positive | 5951173 - 5952327 | 41641.7 |
| solute:na+ symporter, sss family | SAMN04488505_10771 | Not Available | Positive | 5952341 - 5953918 | 57708.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10772 | Not Available | Positive | 5954142 - 5957132 | 109170.0 |
| starch-binding associating with outer membrane | SAMN04488505_10773 | Not Available | Positive | 5957152 - 5958858 | 63878.8 |
| hypothetical protein | SAMN04488505_10774 | Not Available | Positive | 5958872 - 5960503 | 59461.5 |
| rsbt co-antagonist protein rsbr | SAMN04488505_10775 | Not Available | Positive | 5960907 - 5961776 | 32058.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
