Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10756 | Not Available | Positive | 5936765 - 5937178 | 16138.9 |
| methyltransferase domain-containing protein | SAMN04488505_10757 | Not Available | Negative | 5937278 - 5937889 | 23325.6 |
| transcriptional regulator, crp/fnr family | SAMN04488505_10758 | Not Available | Positive | 5938029 - 5938736 | 26758.6 |
| uncharacterized membrane protein yoak, upf0700 family | SAMN04488505_10759 | Not Available | Negative | 5938727 - 5939494 | 28488.1 |
| hypothetical protein | SAMN04488505_10760 | Not Available | Negative | 5939527 - 5939814 | 10971.4 |
| hypothetical protein | SAMN04488505_10761 | Not Available | Negative | 5939801 - 5939890 | 3289.86 |
| glycine cleavage h-protein | SAMN04488505_10762 | Not Available | Negative | 5939896 - 5940267 | 13903.8 |
| calcineurin-like phosphoesterase superfamily domain-containing protein | SAMN04488505_10763 | Not Available | Negative | 5940397 - 5941110 | 27702.2 |
| susd and ragb outer membrane lipoprotein | SAMN04488505_10764 | Not Available | Negative | 5941270 - 5943162 | 70398.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10765 | Not Available | Negative | 5943182 - 5946295 | 112665.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
