Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488505_10746 | Not Available | Negative | 5924837 - 5925901 | 40083.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_10747 | Not Available | Negative | 5925991 - 5926575 | 22709.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_10748 | Not Available | Positive | 5926898 - 5927509 | 23211.2 |
| fecr family protein | SAMN04488505_10749 | Not Available | Positive | 5927585 - 5928805 | 44531.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10750 | Not Available | Positive | 5928947 - 5932285 | 120872.0 |
| starch-binding associating with outer membrane | SAMN04488505_10751 | Not Available | Positive | 5932297 - 5933742 | 52633.2 |
| peroxiredoxin | SAMN04488505_10752 | Not Available | Positive | 5933760 - 5934917 | 42136.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_10753 | Not Available | Negative | 5934968 - 5935684 | 26620.3 |
| methyltransferase domain-containing protein | SAMN04488505_10754 | Not Available | Positive | 5935840 - 5936436 | 22966.1 |
| hypothetical protein | SAMN04488505_10755 | Not Available | Positive | 5936480 - 5936749 | 10337.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
