Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap protein | SAMN04488505_10736 | Not Available | Positive | 5910587 - 5911369 | 29535.3 |
| hypothetical protein | SAMN04488505_10737 | Not Available | Negative | 5911550 - 5912719 | 44672.8 |
| protein of unknown function | SAMN04488505_10738 | Not Available | Positive | 5912875 - 5913756 | 33655.9 |
| hypothetical protein | SAMN04488505_10739 | Not Available | Positive | 5913781 - 5914584 | 30446.6 |
| hypothetical protein | SAMN04488505_10740 | Not Available | Negative | 5914641 - 5915744 | 41156.1 |
| hypothetical protein | SAMN04488505_10741 | Not Available | Positive | 5915866 - 5917143 | 48482.4 |
| spfh domain, band 7 family protein | SAMN04488505_10742 | Not Available | Negative | 5917169 - 5918077 | 34014.6 |
| hypothetical protein | SAMN04488505_10743 | Not Available | Negative | 5918285 - 5919496 | 46693.9 |
| starch-binding associating with outer membrane | SAMN04488505_10744 | Not Available | Negative | 5919710 - 5921332 | 61679.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10745 | Not Available | Negative | 5921336 - 5924629 | 122588.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
