Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10716 | Not Available | Positive | 5884447 - 5884743 | 11408.0 |
| hypothetical protein | SAMN04488505_10717 | Not Available | Positive | 5884802 - 5885323 | 19223.0 |
| pregnancy-associated plasma protein-a | SAMN04488505_10718 | Not Available | Negative | 5885441 - 5886292 | 32285.2 |
| hypothetical protein | SAMN04488505_10719 | Not Available | Negative | 5886378 - 5886785 | 15030.0 |
| hypothetical protein | SAMN04488505_10720 | Not Available | Negative | 5886953 - 5888239 | 47580.5 |
| hypothetical protein | SAMN04488505_10721 | Not Available | Positive | 5889409 - 5890863 | 54721.5 |
| yd repeat-containing protein | SAMN04488505_10722 | Not Available | Positive | 5891065 - 5894283 | 119905.0 |
| rhs repeat-associated core domain-containing protein | SAMN04488505_10723 | Not Available | Positive | 5894306 - 5898562 | 157185.0 |
| hypothetical protein | SAMN04488505_10724 | Not Available | Positive | 5898573 - 5899346 | 29731.0 |
| serine/threonine protein phosphatase 1 | SAMN04488505_10725 | Not Available | Positive | 5899552 - 5900337 | 29916.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
