Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bile acid:na+ symporter, bass family | SAMN04488505_1076 | Not Available | Positive | 5872864 - 5873940 | 39002.6 |
| protein of unknown function | SAMN04488505_1077 | Not Available | Negative | 5874131 - 5876701 | 95913.2 |
| outer membrane transport energization protein exbb | SAMN04488505_1078 | Not Available | Positive | 5877406 - 5878263 | 30270.0 |
| outer membrane transport energization protein exbd | SAMN04488505_1079 | Not Available | Positive | 5878333 - 5878998 | 24280.6 |
| outer membrane transport energization protein exbd | SAMN04488505_10710 | Not Available | Positive | 5879068 - 5879661 | 22008.3 |
| outer membrane transport energization protein tonb | SAMN04488505_10711 | Not Available | Positive | 5879709 - 5880545 | 30522.8 |
| trna modification gtpase trme | SAMN04488505_10712 | Not Available | Positive | 5880774 - 5882156 | 50154.5 |
| hypothetical protein | SAMN04488505_10713 | Not Available | Positive | 5882484 - 5882906 | 16246.9 |
| phage integrase family protein | SAMN04488505_10714 | Not Available | Positive | 5882866 - 5884005 | 44763.3 |
| dna binding domain-containing protein, excisionase family | SAMN04488505_10715 | Not Available | Positive | 5884008 - 5884352 | 13128.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
