Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_106317 | Not Available | Negative | 5862541 - 5863038 | 19275.5 |
| protein of unknown function | SAMN04488505_106318 | Not Available | Negative | 5863044 - 5864009 | 36672.7 |
| phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase | SAMN04488505_106319 | Not Available | Negative | 5863996 - 5865219 | 44190.6 |
| rna polymerase rpb6 | SAMN04488505_106320 | Not Available | Negative | 5865450 - 5865791 | 13180.4 |
| beta-barrel assembly machine subunit bamd | SAMN04488505_106321 | Not Available | Negative | 5865760 - 5866722 | 37673.5 |
| integrase core domain-containing protein | SAMN04488505_106322 | Not Available | Negative | 5867309 - 5867535 | 8516.34 |
| hypothetical protein | SAMN04488505_1072 | Not Available | Negative | 5867915 - 5868736 | 30612.1 |
| laci family transcriptional regulator | SAMN04488505_1073 | Not Available | Negative | 5868772 - 5869797 | 38070.6 |
| regulator of rnase e activity rraa | SAMN04488505_1074 | Not Available | Positive | 5870394 - 5871326 | 35068.4 |
| l-alanine-dl-glutamate epimerase | SAMN04488505_1075 | Not Available | Positive | 5871394 - 5872845 | 54194.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
