Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-amino acid n-acyltransferase ynca | SAMN04488505_106307 | Not Available | Positive | 5854493 - 5854954 | 17867.4 |
| acetyltransferase (gnat) family protein | SAMN04488505_106308 | Not Available | Positive | 5855221 - 5856063 | 31672.2 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN04488505_106309 | Not Available | Negative | 5856168 - 5857058 | 31309.8 |
| gtp cyclohydrolase i | SAMN04488505_106310 | Not Available | Negative | 5857197 - 5857784 | 22142.8 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN04488505_106311 | Not Available | Negative | 5857840 - 5858253 | 15595.5 |
| futalosine hydrolase | SAMN04488505_106312 | Not Available | Positive | 5858315 - 5858977 | 23934.7 |
| 1,4-dihydroxy-6-naphthoate synthase | SAMN04488505_106313 | Not Available | Positive | 5859096 - 5859887 | 29370.2 |
| branched-chain amino acid aminotransferase | SAMN04488505_106314 | Not Available | Negative | 5859884 - 5860723 | 31776.2 |
| 3-oxoacid coa-transferase subunit b | SAMN04488505_106315 | Not Available | Negative | 5861074 - 5861730 | 23028.6 |
| 3-oxoacid coa-transferase subunit a | SAMN04488505_106316 | Not Available | Negative | 5861829 - 5862521 | 25212.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
