Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_106297 | Not Available | Positive | 5835803 - 5837722 | 70609.3 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488505_106298 | Not Available | Positive | 5837862 - 5838617 | 27466.0 |
| hypothetical protein | SAMN04488505_106299 | Not Available | Positive | 5838754 - 5838915 | 6530.81 |
| malate dehydrogenase (quinone) | SAMN04488505_106300 | Not Available | Positive | 5839037 - 5840548 | 55076.3 |
| protein involved in gliding motility spra | SAMN04488505_106301 | Not Available | Negative | 5840619 - 5847875 | 273780.0 |
| holliday junction dna helicase subunit ruva | SAMN04488505_106302 | Not Available | Negative | 5847912 - 5848499 | 21637.7 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN04488505_106303 | Not Available | Positive | 5848647 - 5849645 | 36317.7 |
| signal transduction histidine kinase | SAMN04488505_106304 | Not Available | Negative | 5849721 - 5851643 | 73033.7 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488505_106305 | Not Available | Negative | 5851647 - 5853575 | 72707.3 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488505_106306 | Not Available | Negative | 5853698 - 5854393 | 26701.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
