Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxykinase (atp) | SAMN04488505_106287 | Not Available | Positive | 5820640 - 5822241 | 58949.9 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN04488505_106288 | Not Available | Positive | 5823077 - 5823964 | 31508.6 |
| organic radical activating enzyme | SAMN04488505_106289 | Not Available | Positive | 5823988 - 5824632 | 24177.0 |
| outer membrane protein ompa | SAMN04488505_106290 | Not Available | Positive | 5824758 - 5826638 | 69639.9 |
| 5'-nucleotidase, lipoprotein e(p4) family | SAMN04488505_106291 | Not Available | Negative | 5826789 - 5827526 | 27694.4 |
| dna processing protein | SAMN04488505_106292 | Not Available | Positive | 5827645 - 5828760 | 41187.9 |
| imp dehydrogenase | SAMN04488505_106293 | Not Available | Positive | 5828894 - 5830366 | 52117.8 |
| apolipoprotein n-acyltransferase | SAMN04488505_106294 | Not Available | Positive | 5830570 - 5832213 | 62515.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_106295 | Not Available | Positive | 5832197 - 5832991 | 29289.6 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_106296 | Not Available | Positive | 5833055 - 5835673 | 94437.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
