Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_106267 | Not Available | Negative | 5794497 - 5798159 | 131651.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_106268 | Not Available | Negative | 5798403 - 5802050 | 130480.0 |
| atp-dependent dna helicase recg | SAMN04488505_106269 | Not Available | Negative | 5802192 - 5804129 | 73259.4 |
| citrate synthase | SAMN04488505_106270 | Not Available | Negative | 5804484 - 5805809 | 49345.5 |
| lipopolysaccharide export system permease protein | SAMN04488505_106271 | Not Available | Negative | 5806031 - 5807110 | 41330.6 |
| pp_04540 | SAMN04488505_106272 | Not Available | Negative | 5807282 - 5808412 | Not Available |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488505_106273 | Not Available | Positive | 5808624 - 5809763 | 44420.8 |
| 16s rrna m(7)g-527 methyltransferase | SAMN04488505_106274 | Not Available | Positive | 5809825 - 5810472 | 23849.8 |
| cobalt-zinc-cadmium efflux system protein | SAMN04488505_106275 | Not Available | Negative | 5810438 - 5811355 | 33131.8 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488505_106276 | Not Available | Positive | 5811564 - 5812121 | 21819.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
