Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted o-methyltransferase yrrm | SAMN04488505_106257 | Not Available | Negative | 5782388 - 5783032 | 24337.4 |
| hypothetical protein | SAMN04488505_106258 | Not Available | Negative | 5783217 - 5783915 | 26467.9 |
| hypothetical protein | SAMN04488505_106259 | Not Available | Positive | 5784127 - 5784663 | 20045.5 |
| transporter, sss family | SAMN04488505_106260 | Not Available | Positive | 5784756 - 5786237 | 54619.4 |
| alpha-l-rhamnosidase | SAMN04488505_106261 | Not Available | Negative | 5786550 - 5788925 | 88883.2 |
| fad dependent oxidoreductase tigr03364 | SAMN04488505_106262 | Not Available | Negative | 5788979 - 5790118 | 41790.3 |
| phosphonatase-like hydrolase | SAMN04488505_106263 | Not Available | Negative | 5790144 - 5790902 | 27959.7 |
| hypothetical protein | SAMN04488505_106264 | Not Available | Negative | 5791246 - 5791833 | 21882.1 |
| glycolate oxidase | SAMN04488505_106265 | Not Available | Negative | 5791911 - 5793317 | 51559.9 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488505_106266 | Not Available | Negative | 5793468 - 5794490 | 37855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
