Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN04488505_106247 | Not Available | Positive | 5772013 - 5772483 | 17043.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_106248 | Not Available | Positive | 5772625 - 5772984 | 13583.3 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04488505_106249 | Not Available | Negative | 5773078 - 5774250 | 44340.4 |
| molecular chaperone grpe | SAMN04488505_106250 | Not Available | Positive | 5774508 - 5775050 | 20591.4 |
| molecular chaperone dnaj | SAMN04488505_106251 | Not Available | Positive | 5775160 - 5776320 | 42089.9 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04488505_106252 | Not Available | Positive | 5776585 - 5777532 | 37100.2 |
| hypothetical protein | SAMN04488505_106253 | Not Available | Positive | 5777908 - 5778297 | 14660.8 |
| ca-activated chloride channel family protein | SAMN04488505_106254 | Not Available | Negative | 5778299 - 5780065 | 64210.0 |
| hypoxanthine phosphoribosyltransferase | SAMN04488505_106255 | Not Available | Negative | 5780177 - 5780716 | 20081.6 |
| flagellum-specific peptidoglycan hydrolase flgj | SAMN04488505_106256 | Not Available | Negative | 5780799 - 5782388 | 58470.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
