Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_106227 | Not Available | Negative | 5742080 - 5745295 | 116760.0 |
| dna uptake protein come | SAMN04488505_106228 | Not Available | Negative | 5745493 - 5747544 | 77310.1 |
| hypothetical protein | SAMN04488505_106229 | Not Available | Negative | 5747541 - 5748368 | 29663.0 |
| deoxyadenosine/deoxycytidine kinase | SAMN04488505_106230 | Not Available | Negative | 5748500 - 5749135 | 24995.9 |
| tryptophanyl-trna synthetase | SAMN04488505_106231 | Not Available | Negative | 5749173 - 5750177 | 37559.3 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN04488505_106232 | Not Available | Positive | 5750275 - 5750565 | 11104.2 |
| putative abc transport system atp-binding protein | SAMN04488505_106233 | Not Available | Positive | 5750575 - 5751291 | 26353.0 |
| cob(i)alamin adenosyltransferase | SAMN04488505_106234 | Not Available | Positive | 5751333 - 5751893 | 20716.2 |
| lipoprotein-releasing system atp-binding protein | SAMN04488505_106235 | Not Available | Negative | 5751890 - 5752540 | 23984.0 |
| protein of unknown function | SAMN04488505_106236 | Not Available | Positive | 5752641 - 5752862 | 8647.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
