Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN04488505_106217 | Not Available | Negative | 5730315 - 5730989 | 25591.2 |
| dna polymerase-4 | SAMN04488505_106218 | Not Available | Positive | 5731340 - 5732551 | 45847.0 |
| dna polymerase iii, alpha subunit | SAMN04488505_106219 | Not Available | Positive | 5732555 - 5735536 | 113938.0 |
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN04488505_106220 | Not Available | Positive | 5735553 - 5736011 | 17401.9 |
| res domain-containing protein | SAMN04488505_106221 | Not Available | Positive | 5736026 - 5736493 | 17510.4 |
| aspartate kinase | SAMN04488505_106222 | Not Available | Negative | 5736574 - 5737896 | 48801.3 |
| malate dehydrogenase (nad) | SAMN04488505_106223 | Not Available | Negative | 5737939 - 5739015 | 38763.5 |
| protein of unknown function | SAMN04488505_106224 | Not Available | Negative | 5739038 - 5739352 | 11552.8 |
| dual-action heigh metallo-peptidase | SAMN04488505_106225 | Not Available | Negative | 5739450 - 5740460 | 36537.0 |
| starch-binding associating with outer membrane | SAMN04488505_106226 | Not Available | Negative | 5740626 - 5742065 | 52936.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
