Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN04488505_106207 | Not Available | Positive | 5719362 - 5720225 | 32932.1 |
| hypothetical protein | SAMN04488505_106208 | Not Available | Positive | 5720389 - 5721246 | 30771.1 |
| predicted ester cyclase | SAMN04488505_106209 | Not Available | Positive | 5721302 - 5721697 | 14763.7 |
| muramoyltetrapeptide carboxypeptidase | SAMN04488505_106210 | Not Available | Positive | 5721760 - 5722794 | 37699.5 |
| putative mfs transporter, agza family, xanthine/uracil permease | SAMN04488505_106211 | Not Available | Negative | 5722828 - 5724153 | 46277.7 |
| atp-dependent helicase lhr and lhr-like helicase | SAMN04488505_106212 | Not Available | Positive | 5724217 - 5726670 | 92363.4 |
| putative phosphoesterase | SAMN04488505_106213 | Not Available | Positive | 5726854 - 5727510 | 24657.6 |
| acetoin utilization deacetylase acuc | SAMN04488505_106214 | Not Available | Positive | 5727524 - 5728423 | 33246.7 |
| helix-turn-helix | SAMN04488505_106215 | Not Available | Negative | 5728891 - 5729643 | 28452.9 |
| hypothetical protein | SAMN04488505_106216 | Not Available | Positive | 5729785 - 5730240 | 16858.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
