Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN04488505_106177 | Not Available | Negative | 5679951 - 5680613 | 23939.1 |
| 2-dehydro-3-deoxygluconokinase | SAMN04488505_106178 | Not Available | Negative | 5680615 - 5681610 | 37135.1 |
| d-glucuronate isomerase | SAMN04488505_106179 | Not Available | Negative | 5681610 - 5683004 | 52466.1 |
| tagaturonate reductase | SAMN04488505_106180 | Not Available | Negative | 5683220 - 5684731 | 56496.9 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN04488505_106181 | Not Available | Positive | 5684917 - 5686011 | 40745.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_106182 | Not Available | Positive | 5686372 - 5689710 | 122117.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_106183 | Not Available | Positive | 5689807 - 5691450 | 58645.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_106184 | Not Available | Positive | 5691566 - 5693251 | 61041.4 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04488505_106185 | Not Available | Negative | 5693293 - 5694462 | 43984.7 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN04488505_106186 | Not Available | Negative | 5694557 - 5696137 | 56466.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
