Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_106167 | Not Available | Positive | 5669044 - 5669721 | 25695.0 |
| histidine kinase | SAMN04488505_106168 | Not Available | Positive | 5669688 - 5670521 | 31673.4 |
| two component transcriptional regulator, luxr family | SAMN04488505_106169 | Not Available | Positive | 5670493 - 5671167 | 25379.2 |
| glycosyl hydrolase family 88 | SAMN04488505_106170 | Not Available | Negative | 5671268 - 5672488 | 45523.0 |
| transcriptional regulator, laci family | SAMN04488505_106171 | Not Available | Negative | 5672521 - 5673585 | 39367.9 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN04488505_106172 | Not Available | Negative | 5673637 - 5674401 | 26943.4 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN04488505_106173 | Not Available | Negative | 5674440 - 5675282 | 31678.7 |
| altronate hydrolase | SAMN04488505_106174 | Not Available | Positive | 5675480 - 5677126 | 58896.2 |
| thioredoxin-like domain-containing protein | SAMN04488505_106175 | Not Available | Negative | 5677213 - 5678421 | 45940.1 |
| mfs transporter, acs family, hexuronate transporter | SAMN04488505_106176 | Not Available | Negative | 5678596 - 5679903 | 48209.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
