Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad binding domain-containing protein | SAMN04488505_106157 | Not Available | Negative | 5653397 - 5655100 | 61028.4 |
| transcriptional regulator, arac family | SAMN04488505_106158 | Not Available | Positive | 5655202 - 5656179 | 37387.3 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_106159 | Not Available | Positive | 5656527 - 5659301 | 104335.0 |
| glpgli family protein | SAMN04488505_106160 | Not Available | Positive | 5659314 - 5660063 | 28453.4 |
| glutamate-5-semialdehyde dehydrogenase | SAMN04488505_106161 | Not Available | Negative | 5660064 - 5661314 | 45824.1 |
| glutamate 5-kinase | SAMN04488505_106162 | Not Available | Negative | 5661328 - 5662362 | 36867.7 |
| hypothetical protein | SAMN04488505_106163 | Not Available | Negative | 5662359 - 5664413 | 76158.2 |
| alpha-1,2-mannosidase, putative | SAMN04488505_106164 | Not Available | Positive | 5664593 - 5666890 | 87260.2 |
| hypothetical protein | SAMN04488505_106165 | Not Available | Positive | 5667102 - 5667629 | 20087.4 |
| hypothetical protein | SAMN04488505_106166 | Not Available | Positive | 5668460 - 5668921 | 16815.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
