Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_106147 | Not Available | Negative | 5641011 - 5644505 | 130324.0 |
| fecr family protein | SAMN04488505_106148 | Not Available | Negative | 5644562 - 5645614 | 39289.8 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488505_106149 | Not Available | Negative | 5645699 - 5646292 | 22987.6 |
| glycosyl hydrolases family 43 | SAMN04488505_106150 | Not Available | Negative | 5646382 - 5647401 | 38038.6 |
| sodium/proton antiporter, cpa1 family | SAMN04488505_106151 | Not Available | Negative | 5647644 - 5649272 | 60242.0 |
| methyltransferase domain-containing protein | SAMN04488505_106152 | Not Available | Negative | 5649340 - 5649999 | 25525.6 |
| nadh dehydrogenase | SAMN04488505_106153 | Not Available | Negative | 5650092 - 5651360 | 47427.7 |
| carboxymethylenebutenolidase | SAMN04488505_106154 | Not Available | Positive | 5651493 - 5652359 | 31070.1 |
| acetyltransferase (gnat) family protein | SAMN04488505_106155 | Not Available | Negative | 5652451 - 5652888 | 16362.9 |
| hypothetical protein | SAMN04488505_106156 | Not Available | Positive | 5653062 - 5653199 | 5105.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
