Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488505_106137 | Not Available | Negative | 5627206 - 5628750 | 56440.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_106138 | Not Available | Negative | 5628763 - 5632284 | 128067.0 |
| fecr family protein | SAMN04488505_106139 | Not Available | Negative | 5632529 - 5633716 | 44211.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_106140 | Not Available | Negative | 5633804 - 5634391 | 22768.9 |
| antitoxin component ywqk of the ywqjk toxin-antitoxin module | SAMN04488505_106141 | Not Available | Negative | 5634484 - 5635377 | 33575.1 |
| l-rhamnose mutarotase | SAMN04488505_106142 | Not Available | Negative | 5635475 - 5635882 | 15384.7 |
| peroxiredoxin | SAMN04488505_106143 | Not Available | Negative | 5636065 - 5637222 | 42485.1 |
| pkd-like family protein | SAMN04488505_106144 | Not Available | Negative | 5637243 - 5638682 | 53619.0 |
| protein of unknown function | SAMN04488505_106145 | Not Available | Negative | 5638698 - 5639534 | 31857.2 |
| susd family protein | SAMN04488505_106146 | Not Available | Negative | 5639545 - 5640996 | 54940.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
