Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid adenylation domain-containing protein | SAMN04488505_106127 | Not Available | Negative | 5607905 - 5617894 | 375539.0 |
| transcription antitermination factor nusg | SAMN04488505_106128 | Not Available | Negative | 5618117 - 5618650 | 20340.9 |
| protein of unknown function | SAMN04488505_106129 | Not Available | Negative | 5619264 - 5619911 | 24359.8 |
| general stress protein 26 | SAMN04488505_106130 | Not Available | Negative | 5619999 - 5620535 | 20073.6 |
| cytochrome c554 and c-prime | SAMN04488505_106131 | Not Available | Negative | 5620653 - 5621882 | 45531.2 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN04488505_106132 | Not Available | Negative | 5621924 - 5622595 | 24807.4 |
| hypothetical protein | SAMN04488505_106133 | Not Available | Positive | 5622788 - 5623492 | 26476.9 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488505_106134 | Not Available | Positive | 5623555 - 5624583 | 38809.3 |
| glucosylceramidase | SAMN04488505_106135 | Not Available | Negative | 5624705 - 5626123 | 51523.6 |
| glycosyl hydrolases family 16 | SAMN04488505_106136 | Not Available | Negative | 5626126 - 5626935 | 30722.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
