Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_10697 | Not Available | Positive | 5546106 - 5547587 | 54887.6 |
| protease i | SAMN04488505_10698 | Not Available | Positive | 5547625 - 5548437 | 29965.3 |
| arginase | SAMN04488505_10699 | Not Available | Negative | 5548502 - 5549293 | 29671.6 |
| hypothetical protein | SAMN04488505_106100 | Not Available | Negative | 5549429 - 5549809 | 14509.4 |
| transcriptional regulator, hxlr family | SAMN04488505_106101 | Not Available | Positive | 5549876 - 5550307 | 16387.2 |
| dihydrofolate reductase | SAMN04488505_106102 | Not Available | Positive | 5550491 - 5551054 | 21283.6 |
| f5/8 type c domain-containing protein | SAMN04488505_106103 | Not Available | Negative | 5551200 - 5553281 | 73532.1 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488505_106104 | Not Available | Negative | 5553732 - 5556095 | 87770.2 |
| suppressor of fused protein (sufu) | SAMN04488505_106105 | Not Available | Negative | 5556276 - 5556932 | 24663.0 |
| protein of unknown function | SAMN04488505_106106 | Not Available | Positive | 5557133 - 5557840 | 26364.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
