Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | SAMN04488505_10687 | Not Available | Negative | 5533410 - 5534459 | 37962.4 |
| outer membrane protein tolc | SAMN04488505_10688 | Not Available | Negative | 5534478 - 5535818 | 50325.1 |
| transcriptional regulator, tetr family | SAMN04488505_10689 | Not Available | Negative | 5535962 - 5536618 | 24981.5 |
| hypothetical protein | SAMN04488505_10690 | Not Available | Positive | 5537080 - 5537427 | 13087.6 |
| short-chain dehydrogenase | SAMN04488505_10691 | Not Available | Positive | 5538198 - 5539103 | 32255.1 |
| arac-type dna-binding protein | SAMN04488505_10692 | Not Available | Positive | 5539116 - 5539919 | 31150.6 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN04488505_10693 | Not Available | Positive | 5540073 - 5542505 | 91498.9 |
| response regulator receiver domain-containing protein | SAMN04488505_10694 | Not Available | Positive | 5542498 - 5544474 | 73983.2 |
| cupin domain-containing protein | SAMN04488505_10695 | Not Available | Positive | 5544922 - 5545497 | 20830.8 |
| 4-carboxymuconolactone decarboxylase | SAMN04488505_10696 | Not Available | Positive | 5545508 - 5546077 | 20136.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
