Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_10677 | Not Available | Positive | 5523268 - 5524011 | 25909.1 |
| dna-binding transcriptional regulator, lysr family | SAMN04488505_10678 | Not Available | Negative | 5524240 - 5525097 | 32149.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_10679 | Not Available | Positive | 5525181 - 5526059 | 32992.0 |
| glutamyl-trna synthetase | SAMN04488505_10680 | Not Available | Negative | 5526069 - 5526950 | 33184.7 |
| Trna-asp | Not Available | Not Available | Positive | 5527065 - 5527138 | Not Available |
| thioredoxin reductase | SAMN04488505_10682 | Not Available | Negative | 5527783 - 5528808 | 37743.3 |
| hypothetical protein | SAMN04488505_10683 | Not Available | Negative | 5528876 - 5528968 | 3342.15 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN04488505_10684 | Not Available | Negative | 5528959 - 5529414 | 17506.4 |
| hypothetical protein | SAMN04488505_10685 | Not Available | Negative | 5529550 - 5530326 | 28178.7 |
| multidrug efflux pump subunit acrb | SAMN04488505_10686 | Not Available | Negative | 5530348 - 5533398 | 112024.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
