Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | SAMN04488505_10667 | Not Available | Positive | 5507950 - 5508564 | 22216.8 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488505_10668 | Not Available | Negative | 5508683 - 5509771 | 41547.5 |
| hypothetical protein | SAMN04488505_10669 | Not Available | Negative | 5509798 - 5509917 | 4286.67 |
| arylsulfatase | SAMN04488505_10670 | Not Available | Negative | 5509922 - 5512231 | 84983.4 |
| starch-binding associating with outer membrane | SAMN04488505_10671 | Not Available | Negative | 5512265 - 5513740 | 52705.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10672 | Not Available | Negative | 5513750 - 5516965 | 116226.0 |
| iron complex outermembrane recepter protein | SAMN04488505_10673 | Not Available | Positive | 5517552 - 5519912 | 87057.0 |
| uncharacterized iron-regulated membrane protein | SAMN04488505_10674 | Not Available | Positive | 5519916 - 5521100 | 44517.0 |
| lysophospholipase l1 | SAMN04488505_10675 | Not Available | Negative | 5521272 - 5521934 | 25326.9 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN04488505_10676 | Not Available | Negative | 5521961 - 5523109 | 43384.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
