Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_10647 | Not Available | Positive | 5479902 - 5480639 | 26170.7 |
| exodeoxyribonuclease-3 | SAMN04488505_10648 | Not Available | Negative | 5480640 - 5481413 | 29152.9 |
| transcriptional regulator, asnc family | SAMN04488505_10649 | Not Available | Negative | 5481469 - 5481906 | 15978.4 |
| threonine/homoserine efflux transporter rhta | SAMN04488505_10650 | Not Available | Positive | 5481993 - 5482859 | 31782.1 |
| transcriptional regulator, hxlr family | SAMN04488505_10651 | Not Available | Negative | 5482882 - 5483241 | 13415.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_10652 | Not Available | Positive | 5483404 - 5484201 | 28253.9 |
| levanase | SAMN04488505_10653 | Not Available | Negative | 5484313 - 5485833 | 56602.2 |
| starch-binding associating with outer membrane | SAMN04488505_10654 | Not Available | Negative | 5486161 - 5487879 | 64783.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10655 | Not Available | Negative | 5487898 - 5490978 | 113215.0 |
| fructokinase | SAMN04488505_10656 | Not Available | Negative | 5491033 - 5491938 | 33599.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
